Peer-reviewed DSM Publications

2023

(61) Frey, T. (2023): UXO and environmental risk factors impacting EOD operations in German waters. Prop., Explos., Pyrotech. https://doi.org/10.1002/prep.202300206

(60) Mbani, B., Buck, V. & Greinert, J. (2023): An automated image-based workflow for detecting megabenthic fauna in optical images with examples from the Clarion–Clipperton Zone. Sci Rep  13, 8350. doi.org/10.1038/s41598-023-35518-5

(59) Mbani, B., Greinert, J.(2023): Analysis-ready optical underwater images of Manganese-nodule covered seafloor of the Clarion-Clipperton Zone. Sci Data 10, 316. doi.org/10.1038/s41597-023-02245-5

Cuvelier, D., Vigneron, M., Colaço, A., and Greinert, J. (2023): Delayed response of hermit crabs carrying anemones to a benthic impact experiment at the deep-sea nodule fields of the Peru Basin? Marine Environmental Research 185. doi.org/10.1016/j.marenvres.2023.105899

Seidel, M., Frey, T., and Greinert, J. (2023): Underwater UXO detection using magnetometry on hovering AUVs. Journal of Field Robotics, 1–14. doi.org/10.1002/rob.22159

2022

Wehner, D., Frey, T. (2022): Offshore unexploded ordnance detection and data quality control – A guideline. In: IEEE J. Sel. Top. Appl. Earth Observations Remote Sensing. doi:10.1109/JSTARS.2022.3200144

von See, T.B., Meurer, T., and Greinert, J. (2022): Chemical plume tracking using an AUV with UKF based extremum seeking. IFAC PapersOnLine 55-31, 178–183. doi.org/10.1016/j.ifacol.2022.10.428

Weber, U., Attinger, S., Baschek, B., Boike, J., Borchardt, D., Brix, H., Brüggemann, N., Bussmann, I., Dietrich, P., Fischer, P., Greinert, J., Hajnsek, I., Kamjunke, N., Kerschke, D., Kiendler-Scharr, A., Körtzinger, A., Kottmeier, C., Merz, B., Merz, R., Riese, M., Schloter, M., Schmid, H., Schnitzler, J. P., Sachs, T., Schütze, C., Tillmann, R., Vereecken, H., Wieser, A. and Teutsch, G. (2022): MOSES: A Novel Observation System to Monitor Dynamic Events across Earth Compartments. Bulletin of the American Meteorological Society, 103 (2). doi.org/10.1175/BAMS-D-20-0158.1

(57) She, M., Weiß, T., Song, Y., Urban, P. Greinert, J. and Köser, K. (2022) Marine bubble flow quantification using wide-baseline stereo photogrammetry. ISPRS Journal of Photogrammetry and Remote Sensing, Elsevier, 2022. doi.org/10.1016/j.isprsjprs.2022.06.014

Buck, V., Stäbler, F., Mohrmann, J., Gonzalez, E. and Greinert, J. (2022): Visualising geospatial time series datasets in realtime with the digital earth viewer. Computers & Graphics, 103. doi.org/10.1016/j.cag.2022.01.010

Chen., W., Staneva, J., Grayek., S., Schulz-Stellenfleth, J., and Greinert, J. (2022): The role of heat wave events in the occurrence and persistence of thermal stratification in the southern North Sea. Nat. Hazards Earth Syst. Sci., 22, 1683–1698. doi.org/10.5194/nhess-22-1683-2022

(56) Veloso-Alarcón ME, Urban P, Weiss T, Köser K, She M and Greinert J. (2022): Quantitatively Monitoring Bubble-Flow at a Seep Site Offshore Oregon: Field Trials and Methodological Advances for Parallel Optical and Hydroacoustical Measurements. Front. Earth Sci. doi.org/10.3389/feart.2022.858992

(54) Mbani, B., Schoening, T., Gazis, I.-Z., Koch, R., and Greinert, J. (2022): Implementation of an automated workflow for image‑based seafloor classification with examples from manganese‑nodule covered seabed areas in the Central Pacific Ocean. Scientific Reports. doi.org/10.1038/s41598-022-19070-2

Mohrmann, J. and Greinert, J. (2022): AUV Navigation Correction Based on Automated Multibeam Tile Matching. Sensors, 22, 954. doi.org/10.3390/s22030954

Haalboom, S., Schoening, T., Urban, P., Gazis. I.-Z., de Stigter. H., Gillard, B., Baeye, M., Hollstein, M., Purkiani, K., Reichart, G.-J., Thomsen, L., Haeckel, M., Vink, A. and Greinert, J. (2022): Monitoring of Anthropogenic Sediment Plumes in the Clarion-Clipperton Zone, NE Equatorial Pacific Ocean. Front. Mar. Sci. 9:882155. doi.org/10.3389/fmars.2022.882155

Beck, A.J. Gledhill, M., Kampmeier, M., Feng, C., Schlosser, C., Greinert, J., and Achterberg, E.P. (2022): Explosives compounds from sea-dumped relic munitions accumulate in marine biota. Science of the Total Environment. doi.org/10.1016/j.scitotenv.2021.151266.

(53) Alevizos, E., Huvenne, V.A.I., Schoening, T., Simon-Lledó, E., Robert, K., and Jones, D.O.B. (2022). Linkages between sediment thickness, geomorphology and Mn nodule occurrence: New evidence from AUV geophysical mapping in the Clarion-Clipperton Zone, Deep Sea Research Part I: Oceanographic Research Papers, 179, 103645, 9 Pages. doi.org/10.1016/j.dsr.2021.103645

2021

Baeye, M., Purkiani, K., de Stigter, H., Gillard, B., Fettweis, M., Greinert, J. (2021): Tidally Driven Dispersion of a Deep-Sea Sediment Plume Originating from Seafloor Disturbance in the DISCOL Area (SE-Pacific Ocean). Geosciences, 12, 8. doi.org/10.3390/geosciences12010008

(52) Jones, D.O.B., Simon-Lledó, E., Amon, D.J., Bett, B.J., Caulle, C., Clément, L., Connelly, D.P., Dahlgren, T.G., Durden, J.M., Drazen, J.C., Felden, J., Gates, A.R., Georgieva, M.N., Glover, A.G., Gooday, A.J., Hollingsworth, A.L., Horton, T., James, R.H., Jeffreys, R.M., Laguionie-Marchais, C., Leitner, A.B., Lichtschlag, A., Menendez, A., Paterson, G.L.J., Peel, K.,  Robert, K., Schoening, T., Shulga, N.A., Smith, C.R., Taboada, S., Thurnherr, A.M., Wiklund, H., Young, C.R., and Huvenne, V.A.I. (2021). Environment, ecology, and potential effectiveness of an area protected from deep-sea mining (Clarion Clipperton Zone, abyssal Pacific), Progress in Oceanography, 197, 102653, 19 Pages. doi.org/10.1016/j.pocean.2021.102653

(51) von See, T.B., Meurer, T., and Greinert, J. (2021). Marine boundary layer tracking using an AUV with UKF based extremum seeking, IFAC-PapersOnLine, 54 (16), 320–326, 13th IFAC Conference on Control Applications in Marine Systems, Robotics, and Vehicles CAMS 2021. doi.org/10.1016/j.ifacol.2021.10.111

(50) Kampmeier, M., Michaelis, P., Wehner, D., Frey, T., Seidel, M., Wendt, J., and Greinert, J. (2021). Workflow towards autonomous and semi-automized UXO Survey and Detection, Acoustical Society of America: Proceedings of Meetings on Acoustics, 44 (1), 11 Pages. doi.org/10.1121/2.0001492

(49)  Gazis, I.-Z. and Greinert, J. (2021). Importance of Spatial Autocorrelation in Machine Learning Modeling of Polymetallic Nodules, Model Uncertainty and Transferability at Local Scale, Minerals, 11 (11), 1172, 33 Pages. doi.org/10.3390/min11111172

(32) Liu, H., Büscher, J. V., Köser, K., Greinert, J., Song, H., Chen, Y., and Schoening, T. (2021): Automated Activity Estimation of the Cold-Water Coral Lophelia pertusa by Multispectral Imaging and Computational Pixel Classification, Journal of Atmospheric and Oceanic Technology, 38 (2), 141-154. doi.org/10.1175/JTECH-D-19-0139.1

2020

(48) Schoening, T., Purser, A., Langenkämper, D., Suck, I., Taylor, J., Cuvelier, D., Lins, L., Simon-Lledó, E., Marcon, Y., Jones, D. O. B., Nattkemper, T., Köser, K., Zurowietz, M., Greinert, J., and Gomes-Pereira, J. (2020): Megafauna community assessment of polymetallic-nodule fields with cameras: platform and methodology comparison, Biogeosciences, 17, 3115–3133. doi.org/10.5194/bg-17-3115-2020

(44) Kampmeier, M., van der Lee, E. M., Wichert, U., and Greinert, J. (2020) Exploration of the munition dumpsite Kolberger Heide in Kiel Bay, Germany: Example for a standardised hydroacoustic and optic monitoring approach, Continental Shelf Research. doi.org/10.1016/j.csr.2020.104108

(34) Gausepohl, F., Hennke, A., Schoening, T., Köser, K., and Greinert, J. (2020): Scars in the abyss: reconstructing sequence, location and temporal change of the 78 plough tracks of the 1989 DISCOL deep-sea disturbance experiment in the Peru Basin, Biogeosciences, 17, 1463–1493. doi.org/10.5194/bg-17-1463-2020

2019

(47) Veloso, M., Greinert, J, Mienert, J., and De Batist, M.(2019). Corrigendum: A new methodology for quantifying bubble flow rates in deep water using splitbeam echosounders: Examples from the Arctic offshore NW Svalbard. Limnol. Oceanogr.: Methods 13, 2015, 267–287. doi.org/10.1002/lom3.10313

(45) Veloso, M., Jansson, P., De Batist, M., Minshull, T., Westbrook, G., Pälike, H., Bünz, S., Wright, I., and Greinert, J. (2019) Variability of acoustically evidenced methane bubble emissions offshore western Svalbard, Geophysical Research Letters, 46, 9072–9081. doi.org/10.1029/2019GL082750

(43) She, M., Song, Y., Mohrmann, J., and Köser, K (2019), Adjustment and Calibration of Dome Ports for Underwater Vision. The 41th German Conference on Pattern Recognition (GCPR 2019). doi.org/10.1007/978-3-030-33676-9_6

(42) Song, Y., Köser, K., Kwasnitschka, T., and Koch, R. (2019), Iterative Refinement for Underwater 3D Reconstruction: Application to disposed underwater munitions in the Baltic Sea. ISPRS - International Archives of the Photogrammetry, Remote Sensing and Spatial Information Sciences, XLII-2/W10 . pp. 181-187. doi.org/10.5194/isprs-archives-XLII-2-W10-181-2019.

(40) Schoening, T. (2019) A sea-going high-performance compute cluster, Frontiers in Marine Sciences. doi.org/10.3389/fmars.2019.00736

2018

(39) Alevizos, E. and Greinert, J. (2018), The Hyper-Angular Cube Concept for Improving the Spatial and Acoustic Resolution of MBES Backscatter Angular Response Analysis. Geosciences, 8, 446. doi.org/10.3390/geosciences8120446

(38) Liu, H., Sticklus, J., Köser, K., Hoving, H.-J. T., Song, H., Chen, Y., Greinert, J., and Schoening, T. (2018), TuLUMIS - a tunable LED-based underwater multispectral imaging system, Opt. Express 26 , 7811-7828 doi.org/10.1364/OE.26.007811

(37) Schoening, T., Köser, K., and Greinert, J. (2018). An acquisition, curation and management workflow for sustainable, terabyte-scale marine image analysis. Sci. Data 5:180181. doi.org/10.1038/sdata.2018.181

(35) Gazis, I.Z., Schoening, T., Alevizos, E., and Greinert, J. (2018), Quantitative mapping and predictive modeling of Mn nodules’ distribution from hydroacoustic and optical AUV data linked by random forests machine learning. Biogeosciences, 15, 7347–7377. doi.org/10.5194/bg-15-7347-2018

(33) Peukert, A., Schoening, T., Alevizos, E.., Köser, K, Kwasnitschka, T., and Greinert, J. (2018) Understanding Mn-nodule distribution and evaluation of related deep-sea mining impacts using AUV-based hydroacoustic and optical data, Biogeosciences, 15, 2525-2549. doi.org/10.5194/bg-15-2525-2018

2017

(31) Plaza-Faverola, A., Vadakkepuliyambatta, S., Hong,W.-L., Mienert, J., Bünz, S. Chand, S., and Greinert, J. (2017) Bottom-simulating reflector dynamics at Arctic thermogenic gas provinces: An example from Vestnesa Ridge, offshore west Svalbard, J. Geophys. Res. Solid Earth, 122. doi.org/10.1002/2016JB013761.

(30) Römer, M., Wenau, S., Mau, S., Veloso, M., Greinert, J. , Schlüter, M., and Bohrmann, G. (2017) Assessing marine gas emission activity and contribution to the atmospheric methane inventory: A multidisciplinary approach from the Dutch Dogger Bank seep area (North Sea), Geochem. Geophys. Geosyst., 18. doi.org/10.1002/2017GC006995

(29) Schoening, T., Jones, D.O.B., and Greinert, J. (2017) Compact-Morphology-based poly-metallic Nodule Delineation. Scientific Reports, (May), 1–12. doi.org/10.1038/s41598-017-13335-x

(28) Alevizos, E., Snellen, J., Simons, D., Siemes, K., and  Greinert, J. (2017) Multi-angle backscatter classification and sub-bottom profiling for improved seafloor characterization. Mar. Geophys Res. doi.org/10.1007/s11001-017-9325-4

(27) Xu, C., Greinert, J., Haeckel, M., Bialas, J., Dimitrov, L. and Zhao, G. (In Press / Accepted) The Character and Formation of Elongated Depressions on the Upper Bulgarian Slope. Journal of Ocean University of China, 17 (1). doi.org/10.1007/s11802-018-3460-7

(26) Pohlman, J.W., Greinert, J., Ruppel, C., Silyakova, A., Vielstädte, L., Casso, M., Mienert, J.,Bünz, S. (2017) Enhanced CO2 uptake at a shallow Arctic Ocean seep field overwhelms the positive warming potential of emitted methane PNAS 2017 : 1618926114v1-201618926. doi.org/10.1073/pnas.161892611

(25) Jones, D.O.B., Kaiser, S, Sweetman, A.K., Smith, C.R., Menot, L., Vink A, Trueblood, D., Greinert, J., Billet, D.S.M., Martinez Arbizu, P., Radziejewska, T., Singh, Ravail, Ingole, B., Stratmann, T., Simon-Lledó, E., Durden, J.M., Clark, M.R. (2017) Biological responses to disturbance from simulated deep-sea polymetallic nodule mining. PLoS ONE 12(2):e0171750. doi.org/10.1371/journal.pone.0171750

(24) Langenkämper, D., Zurowietz, M., Schoening, T. and Nattkemper ,T.W. (2017) BIIGLE 2.0 - Browsing and Annotating Large Marine Image Collections. Front. Mar. Sci. 4:83. doi.org/10.3389/fmars.2017.00083

2016

(23) Urban, P., Köser, K. and Greinert, J. (2016) Processing of multibeam water column image data for automated bubble/seep detection and repeated mapping. Limnol. Oceanogr. Methods. doi.org/10.1002/lom3.10138

(22) Lorenson, T., Greinert, J., and Coffin, R. (2016) Dissolved methane in the Beaufort Sea and the Arctic Ocean, 1992-2009; Sources and atmospheric flux. Limnol. Oceanogr. doi.org/10.1002/lno.10457

(21) Durden, J. M., Schoening, T., Althaus, F., Friedman, A., Garcia, R.l, Glover, A. G., Greinert, J., Jacobsen Stout, N., Jones, D. O.B., Jordt, A., Kaeli, J., Köser, K., Kuhnz, L. A., Lindsay, D., Morris, K. J., Nattkemper, T. W., Osterloff, J., Ruhl, H. A., Singh, H., Tran, M., Bett, B. J. (2016) Perspectives in visual imaging for marine biology and ecology: from acquisition to understanding. In, Hughes, R.N., Hughes, D.J., Smith, I.P. and Dale, A.C. (eds.) Oceanography and Marine Biology: An Annual Review, Vol. 54. Boca Raton, US, CRC Press, 1-72. doi.org/10.1201/9781315368597

(20) Gomes-Pereira, J. N., Auger, V., Beisiegel, K., Benjamin, R., Bergmann, M., Bowden, D.,  Buhl-Mortensen, P., De Leo, F.C., Dionísio, G., Durden, J.M., Edwards, L., Friedman, A., Greinert, J., Jacobsen-Stout, N., Lerner, S., Leslie, M., Nattkemper, T.W., Sameoto, J.A., Schoening, T., Schouten, R., Seager, J., Singh, H., Soubigou, O., Tojeira, I., van den Beld, I., Dias, F., Tempera, F., S. Santos, R. (2016) Current and future trends in marine image annotation software, Progress in Oceanography, Volume 149, Pages 106-120, ISSN 0079-6611. doi.org/10.1016/j.pocean.2016.07.005.

(19) v. Haren, H., Greinert, J. (2016) Turbulent high-latitude oceanic intrusions—details of non-smooth apparent isopycnal transport West of Svalbard. Ocean Dynamics (2016) 66:785–794. doi.org/10.1007/s10236-016-0955-x

(18) James R.H., Bousquet, P., Bussmann, I., Haeckel, M., Kipfer, R., Leifer, I., Niemann, H., Ostrovsky, I., Piskozub, J., Rehder, G., Treude, T., Vielstädte,, L., and Greinert, J. (2016) Effects of climate change on methane emissions from seafloor sediments in the Arctic Ocean: A review. Limnol. Oceanogr. 00, 2016, 00–00. doi.org/10.1002/lno.10307

(17) Jordt, A., Köser, K., Koch, R. (2016) Refractive 3D reconstruction on underwater images, Methods in Oceanography, Volumes 15–16, Pages 90-113, ISSN 2211-1220. doi.org/10.1016/j.mio.2016.03.001.

(16) Kwasnitschka, T., Köser, K., Sticklus, J., Rothenbeck, M., Weiß, T., Wenzlaff, E., Schoening, T., Triebe, L., Steinführer, A., Devey, C., Greinert, J. (2016) DeepSurveyCam: A deep ocean optical survey system, Sensors 16(2), 164. doi.org/10.3390/s16020164

(15) Luo, M., Dale, A.W., Haffert, L., Haeckel, M., Koch, S., Crutchley, G., De Stigter, H., Chen, D., Greinert, J. (2016) A quantitative assessment of methane cycling in Hikurangi Margin sediments (New Zealand) using geophysical imaging and biogeochemical modeling. Geochem. Geophys. Geosyst. doi.org/10.1002/2016GC006643

(14) Lund Myhre, C., Ferré, B., Platt, S. M., Silyakova, A., Hermansen, O., Allen, G., Pisso, I., Schmidbauer, N., Stohl, A., Pitt, J., Jansson, P., Greinert, J., Percival, C., Fjaeraa, A. M., O'Shea, S. J., Gallagher, M., Le Breton, M., Bower, K. N., Bauguitte, S. J. B., Dalsøren, S., Vadakkepuliyambatta, S., Fisher, R. E., Nisbet, E. G., Lowry, D., Myhre, G., Pyle, J. A., Cain, M., Mienert, J. (2016) Extensive release of methane from Arctic seabed west of Svalbard during summer 2014 does not influence the atmosphere, Geophys. Res. Lett., 43, 4624–4631. doi.org/10.1002/2016GL068999

(13) Saurer, O., Baatz, G., Köser, K., Ladicky, L., Pollefeys, M. (2016) Image Based Geo-localization in the Alps. International Journal of Computer Vision, Volume 116 Issue 3, Pages 213-225. doi.org/10.1007/s11263-015-0830-0

(12) Schoening, T., Kuhn, T., Jones, D. O.B., Simon-Lledo, E., Nattkemper, T. W., (2016) Fully automated image segmentation for benthic resource assessment of poly-metallic nodules. Methods in Oceanography, Volumes 15–16, Pages 78-89, ISSN 2211-1220. doi.org/10.1016/j.mio.2016.04.002

(11) Schoening, T., Osterloff, J., Nattkemper, T. W. (2016) RecoMIA — Recommendations for Marine Image Annotation : Lessons Learned and Future Directions  Frontiers in Marine Science. doi.org/10.3389/fmars.2016.00059

2015

(10) Alevizos, E., Snellen, M., Simons, D., Siems, K., and Greinert, J. (2015) Acoustic discrimination of relatively homogeneous fine sediments using Bayesian classification on MBES data. Marine Geology, 370 (2015) 31–42. doi.org/10.1016/j.margeo.2015.10.007

(9) Jordt, A. Zelenka, C., Schneider v. Deimling, J., Koch, R., Köser, K. (2015) The Bubble Box: Towards an Automated Visual Sensor for 3D Analysis and Characterization of Marine Gas Release Sites, Sensors, 15(12), 30716-30735. doi.org/10.3390/s151229825

(8) Koch, S., Berndt, C., Bialas, J., Haeckel, M., Crutchley, G., Papenberg, C., Klaeschen, D., and Greinert, J. (2015) Gas-controlled seafloor doming. Geology. doi.org/10.1130/G36596.1

(7) Steinle, L., Graves, C.A., Treude, T., Ferré, B., Biastoch, A., Bussmann, I., Berndt, C., Krastel, S., James, R.H., Behrens, E., Böning, C.W., Greinert, J., Sapart, C.-J., Scheinert, M., Sommer, S., Lehmann, M. F., and Niemann, H. (2015) Water column methanotrophy controlled by arapid oceanographic switch. Nature Geosciences. doi.org/10.1038/ngeo2420

(6) Veloso, M., Greinert,. J., Mienert, J., and De Batits, M. (2015): A new methodology for quantifying bubble flow rates in deep water using splitbeam echosounders: Examples from the Arctic offshore NW-Svalbard. Limnol. Oceanogr.: Methods. doi.org/10.1002/lom3.10024

2014

(5) Dale, A., Sommer, S., Ryabenko, E., Noffke, A., Bohlen, L., Wallmann, K., Stolpovsky, K., Greinert, J., and Pfannkuche, O. (2014): Benthic nitrogen fluxes and fractionation of nitrate in the Mauritanian oxygen minimum zone (Eastern Tropical North Atlantic). Geochimica et Cosmochimica Acta, 134, 234-256. doi.org/10.1016/j.gca.2014.02.026

(4) Hoekendijk, J.P.A., de Vries, J., van der Bolt, K., Greinert, J., Brasseur, S., Camphuysen, K.C.J., and Aarts, G. (2014) Estimating the spatial position of marine mammals based on digital camera recordings. Ecology and Evolution. doi.org/10.1002/ece3.1353

(3) Smith, J.A.,Mienert. J., Bünz, S., and Greinert, J. (2014) Thermogenic methane injection via bubble transport into the upperArctic Ocean from the hydrate-charged Vestnesa Ridge, Svalbard. Geochemistry, Geophysics, Geosystems. doi.org/10.1002/2013GC005179

(2) Hamdan, L.J., Coffin, R.B., Sikaroodi, M., Greinert, J., Treude, T., and Gillevet, P.M. (2013) Ocean currents shape the microbiome of Arctic marine sediments. ISME J. 2013 Apr;7(4):685-96. doi.org/10.1038/ismej.2012.143
 

2013

(1) v. Haren, H., Greinert, J. (2013): Variability of internal frontal bore breaking above Opouawe Bank methane seep area (New Zealand). Geochemistry, Geophysics, Geosystems, 14 (7), 2460-2473. doi.org/10.1002/ggge.20170